BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H04SP1|AL425772
(644 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1409 1219 0.0
>3x_Contig1409
Length = 9404
Score = 1219 bits (610), Expect = 0.0
Identities = 632/644 (98%)
Strand = Plus / Plus
Query: 1 atccatcagcagctaaagacgggtccatagatatctttaatttcgatttcaacgctttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atccatcagcagctaaagacgggtccatagatatctttaatttcgatttcaacgctttaa 360
Query: 61 gagttctctttctacgcagtttcttataaatcgagacagatcttctctgatctttgahaa 120
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 361 gagttctctttctacgcagtgtcttataaatcgagacagatcttctctgatctttgaaaa 420
Query: 121 cactattcaacggcaacaaaacggcaaatattttaaatacggtgggtttccaacgtttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cactattcaacggcaacaaaacggcaaatattttaaatacggtgggtttccaacgtttgt 480
Query: 181 gtattgagttgtgacttgtaagacccttttaaacagttcgcctgtyactgtccactgata 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 481 gtattgagttgtgacttgtaagacccttttaaacagttcgcctgtaactgtccactgata 540
Query: 241 aacgatccgagtcaataatcacaattaaaaaaccaggagaagaaaacagagatcaaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aacgatccgagtcaataatcacaattaaaaaaccaggagaagaaaacagagatcaaagga 600
Query: 301 aagataatwatttatcccttaaccgaatgcagaaaatatgattatttcattcaaaggcac 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aagataataatttatcccttaaccgaatgcagaaaatatgattatttcattcaaaggcac 660
Query: 361 ttattgaagcgtgttagaccttgttaaatacagtwatttcaaggcaaaaaccaaaatgcg 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 661 ttattgaagcgtgttagaccttgttaaatacagtaatttcaaggcaaaaaccaaaatgcg 720
Query: 421 tctctatatcatgtcttcatctgcmtgttctttttgtataaagcctggatactaaacctt 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 721 tctctatatcatgtcttcatctgcatgttctttttgtataaagcctggatactaaacctt 780
Query: 481 tataaaaccttaaaahaataataataaagattccacatcccaatagtcccaacaaaaaaa 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tataaaaccttaaaaaaataataataaagattccacatcccaatagtcccaacaaaaaaa 840
Query: 541 caagccacaagaaagahaatgaaaaatcaagttttgctgaaatactgccacaactggaat 600
||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 841 caagcaacaagaaagaaaatgaaaaatcaagttttgctgaaatactgcaacaactggaat 900
Query: 601 atgacttccttgaaccgtatgtkctgcacttcataagtctaatt 644
|||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 901 atgacttccttgaaccgtatgtgctgcacttcataagtataatt 944
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5161
Number of Sequences: 1807
Number of extensions: 5161
Number of successful extensions: 112
Number of sequences better than 1.0e-20: 1
length of query: 644
length of database: 10,358,551
effective HSP length: 16
effective length of query: 628
effective length of database: 10,329,639
effective search space: 6487013292
effective search space used: 6487013292
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)